corradjust package

• corradjust.corradjust module
  • CorrAdjust
    • CorrAdjust.fit()
    • CorrAdjust.fit_PCA()
    • CorrAdjust.transform()
    • CorrAdjust.compute_confounders()
    • CorrAdjust.compute_feature_scores()
    • CorrAdjust.make_volcano_plot()
    • CorrAdjust.make_corr_distr_plot()
    • CorrAdjust.export_corrs()
    • CorrAdjust._search_confounder_PCs()
    • CorrAdjust._compute_corrs_and_scores()
    • CorrAdjust._best_iter_scores_to_df()
    • CorrAdjust._make_best_iter_scores_plot()
    • CorrAdjust._compute_raw_and_clean_corrs()
    • CorrAdjust._check_df_data()
    • CorrAdjust._check_df_samp_ann()
• corradjust.metrics module
  • CorrScorer
    • CorrScorer.compute_index()
    • CorrScorer.compute_corr_scores()
    • CorrScorer._compute_ref_feature_coll_mask()
    • CorrScorer._compute_train_val_mask()
    • CorrScorer._compute_feature_totals()
    • CorrScorer._compute_scores_for_ref_feature_coll()
• corradjust.plots module
  • PCAVariancePlotter
    • PCAVariancePlotter.plot()
    • PCAVariancePlotter.save_plot()
  • GreedyOptimizationPlotter
    • GreedyOptimizationPlotter.plot()
    • GreedyOptimizationPlotter.save_plot()
  • VolcanoPlotter
    • VolcanoPlotter.plot()
    • VolcanoPlotter._plot_one_state()
    • VolcanoPlotter.save_plot()
  • CorrDistrPlotter
    • CorrDistrPlotter.add_plots()
    • CorrDistrPlotter.save_plot()
• corradjust.utils module
  • MeanCenterizer
    • MeanCenterizer.fit()
    • MeanCenterizer.transform()
  • Winsorizer
    • Winsorizer.fit()
    • Winsorizer.transform()
  • MedianOfRatios
    • MedianOfRatios.fit()
    • MedianOfRatios.transform()
  • make_dummy_samp_ann()
  • compute_pearson_columns()
  • flatten_corrs()
  • compute_corr_pvalues()
  • regress_out_columns()
  • find_peak()
  • hypergeom_pvalues()
  • log_binom_coef()
  • compute_aggregated_scores()